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Gymnothorax andamanensis Mohapatra, Kiruba-Sankar, Praveenraj & Mohanty 2019
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Gymnothorax aurocephalus Nashad, Mohapatra, Varghese, Ramalingam, Bineesh & Mohanty 2020
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Gymnothorax conspersus Poey 1867
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Gymnothorax elaineheemstrae Sithole, Smith, Mwale & Gouws 2020
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Gymnothorax indicus
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Gymnothorax longinaris Allen, Erdmann & Sianipar 2018
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Gymnothorax maderensis (Johnson 1862)
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Gymnothorax mishrai
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Gymnothorax odishi
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Gymnothorax paucivertebralis Allen, Erdmann & Sianipar 2018
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Gymnothorax pharaonis
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Gymnothorax polygonius Poey 1875
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Gymnothorax pseudomelanosomatus Loh, Shao & Chen 2015
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Gymnothorax pseudoprolatus
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Gymnothorax pseudotile Mohapatra, Smith, Ray, Mishra & Mohanty 2017
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Gymnothorax smithi Sumod, Mohapatra, Sanjeevan, Kishor & Bineesh 2019
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Gymnothorax unicolor (Delaroche 1809)
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Gymnothorax vicinus (Castelnau 1855)
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Gymnothorax vietnamensis Smith, Hibino & Ho 2018
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Gymnothorax visakhaensis Mohapatra, Smith, Mohanty, Mishra & Tudu 2017
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