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Started:
May 21, 2024 12:33
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Completed:
13:46:36
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Failed:
No.
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Status:
completed
Events (most recent first):
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12:59:48
(infos)
resources_controller.rb:100>resource.rb:505>content_server_connection.rb:106>pub_log.rb:48= Connecting to https://content.eol.org/ ...
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12:59:44
(infos)
resources_controller.rb:100>resource.rb:505>content_server_connection.rb:106>pub_log.rb:48= Connecting to https://content.eol.org/ ...
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12:59:42
(infos)
resources_controller.rb:100>resource.rb:505>content_server_connection.rb:106>pub_log.rb:48= polling for trait diff metadata: /resources/1219/publish_diffs.json?since=1716313592
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13:46:36
(ends)
resource.rb:225>fast.rb:177>pub_log.rb:73>import_log.rb:89= Complete
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13:46:36
(ends)
delayed_job.rb:17>resource.rb:225>fast.rb:176>pub_log.rb:48= TOTAL TIME: 73.2m
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13:46:36
(starts)
delayed_job.rb:17>resource.rb:225>fast.rb:163>pub_log.rb:48= TraitBank::Denormalizer.update_resource_vernaculars
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13:46:36
(starts)
resource.rb:225>fast.rb:163>pub_log.rb:20>import_log.rb:82= Running
-
13:46:32
(starts)
delayed_job.rb:17>resource.rb:225>fast.rb:161>pub_log.rb:48= Resource#fix_native_nodes
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13:46:32
(starts)
resource.rb:225>fast.rb:161>pub_log.rb:20>import_log.rb:82= Running
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13:46:32
(infos)
delayed_job.rb:17>resource.rb:225>fast.rb:235>pub_log.rb:48= Removing /app/tmp/i_nat_dat_covera_node_ancestors.tsv
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13:46:32
(infos)
delayed_job.rb:17>resource.rb:225>fast.rb:235>pub_log.rb:48= Removing /app/tmp/i_nat_dat_covera_scientific_names.tsv
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13:46:32
(infos)
delayed_job.rb:17>resource.rb:225>fast.rb:235>pub_log.rb:48= Removing /app/tmp/i_nat_dat_covera_nodes.tsv
-
13:46:32
(infos)
resource.rb:225>fast.rb:334>slurp.rb:36>pub_log.rb:48= Removing trait and metadata files
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13:46:32
(infos)
resource.rb:225>fast.rb:334>slurp.rb:351>pub_log.rb:48= Nodes: 672491; Traits: 649971; MetaData: 0
-
13:46:29
(infos)
resource.rb:225>fast.rb:334>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_metadata.tsv
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13:46:29
(infos)
resource.rb:225>fast.rb:334>slurp.rb:592>pub_log.rb:48= adding new metadata
-
13:46:29
(infos)
resource.rb:225>fast.rb:334>slurp.rb:351>pub_log.rb:48= Nodes: 672491; Traits: 649971; MetaData: 0
-
13:46:05
(infos)
resource.rb:225>fast.rb:334>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_7.csv
-
13:45:09
(infos)
fast.rb:334>each.rb:9>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_6.csv
-
13:33:08
(infos)
fast.rb:334>each.rb:9>slurp.rb:329>pub_log.rb:48= Waiting 12 minutes for the part 6 of 7 to be added to neo4j.
-
13:33:08
(infos)
fast.rb:334>each.rb:9>slurp.rb:351>pub_log.rb:48= Nodes: 561119; Traits: 541967; MetaData: 0
-
13:32:04
(infos)
fast.rb:334>each.rb:9>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_5.csv
-
13:22:03
(infos)
fast.rb:334>each.rb:9>slurp.rb:329>pub_log.rb:48= Waiting 10 minutes for the part 5 of 7 to be added to neo4j.
-
13:22:03
(infos)
fast.rb:334>each.rb:9>slurp.rb:351>pub_log.rb:48= Nodes: 450540; Traits: 434759; MetaData: 0
-
13:21:11
(infos)
fast.rb:334>each.rb:9>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_4.csv
-
13:13:10
(infos)
fast.rb:334>each.rb:9>slurp.rb:329>pub_log.rb:48= Waiting 8 minutes for the part 4 of 7 to be added to neo4j.
-
13:13:10
(infos)
fast.rb:334>each.rb:9>slurp.rb:351>pub_log.rb:48= Nodes: 322540; Traits: 310263; MetaData: 0
-
13:12:07
(infos)
fast.rb:334>each.rb:9>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_3.csv
-
13:06:07
(infos)
fast.rb:334>each.rb:9>slurp.rb:329>pub_log.rb:48= Waiting 6 minutes for the part 3 of 7 to be added to neo4j.
-
13:06:07
(infos)
fast.rb:334>each.rb:9>slurp.rb:351>pub_log.rb:48= Nodes: 194540; Traits: 183983; MetaData: 0
-
13:05:05
(infos)
fast.rb:334>each.rb:9>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_2.csv
-
13:01:04
(infos)
fast.rb:334>each.rb:9>slurp.rb:329>pub_log.rb:48= Waiting 4 minutes for the part 2 of 7 to be added to neo4j.
-
13:01:04
(infos)
fast.rb:334>each.rb:9>slurp.rb:351>pub_log.rb:48= Nodes: 66540; Traits: 63002; MetaData: 0
-
13:00:24
(infos)
fast.rb:334>each.rb:9>slurp.rb:275>pub_log.rb:48= Importing 128000 rows from publish_traits_chunk_1.csv
-
13:00:24
(warns)
resource.rb:225>fast.rb:334>slurp.rb:308>pub_log.rb:48= Found 811042 rows, will break up into 7 of 128000
-
13:00:23
(infos)
resource.rb:225>fast.rb:334>slurp.rb:582>pub_log.rb:48= adding new traits
-
13:00:23
(infos)
resource.rb:225>fast.rb:334>slurp.rb:611>pub_log.rb:48= not removing any traits
-
13:00:23
(infos)
fast.rb:334>slurp.rb:20>content_server_connection.rb:106>pub_log.rb:48= Connecting to https://content.eol.org/ ...
-
13:00:18
(infos)
fast.rb:334>slurp.rb:20>content_server_connection.rb:106>pub_log.rb:48= Connecting to https://content.eol.org/ ...
-
13:00:18
(infos)
fast.rb:334>slurp.rb:20>content_server_connection.rb:106>pub_log.rb:48= polling for trait diff metadata: /resources/1219/publish_diffs.json
-
13:00:18
(starts)
delayed_job.rb:17>resource.rb:225>fast.rb:202>pub_log.rb:48= #publish_traits = TraitBank::Slurp.load_resource_from_repo
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13:00:18
(starts)
resource.rb:225>fast.rb:202>pub_log.rb:20>import_log.rb:82= Running
-
13:00:17
(starts)
resource.rb:225>fast.rb:155>page_creator.rb:39>pub_log.rb:48= Fixing native nodes...
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13:00:17
(warns)
resource.rb:225>fast.rb:155>page_creator.rb:32>pub_log.rb:48= Skipping reindexing. You should reindex soon.
-
13:00:17
(infos)
fast.rb:155>grouping.rb:39>page_creator.rb:26>pub_log.rb:48= importing 683 Pages
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13:00:17
(infos)
fast.rb:155>grouping.rb:39>page_creator.rb:26>pub_log.rb:48= importing 1000 Pages
-
13:00:17
(infos)
fast.rb:155>grouping.rb:39>page_creator.rb:26>pub_log.rb:48= importing 1000 Pages
-
13:00:17
(infos)
fast.rb:155>grouping.rb:39>page_creator.rb:26>pub_log.rb:48= importing 1000 Pages
-
13:00:16
(infos)
fast.rb:155>grouping.rb:39>page_creator.rb:26>pub_log.rb:48= importing 1000 Pages
-
13:00:16
(infos)
fast.rb:155>grouping.rb:39>page_creator.rb:26>pub_log.rb:48= importing 1000 Pages
